Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC113Q9H0I3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 TSPY14P-201ENST00000303979 915 ntBASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC113Q9H0I3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 LINC01568-207ENST00000641790 1380 ntBASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 TSPY23P-201ENST00000440136 739 ntBASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 PRSS44-201ENST00000515154 1146 ntBASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 AC020763.4-201ENST00000623414 4170 ntBASIC21.02■□□□□ 0.96
CCDC113Q9H0I3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC113Q9H0I3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 C2orf69P3-201ENST00000565542 1120 ntBASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC113Q9H0I3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21■□□□□ 0.95
CCDC113Q9H0I3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC113Q9H0I3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 INGX-201ENST00000359239 846 ntBASIC21■□□□□ 0.95
CCDC113Q9H0I3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC113Q9H0I3 EGLN1P1-201ENST00000531623 762 ntBASIC21■□□□□ 0.95
CCDC113Q9H0I3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms