Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 WIZP1-201ENST00000531444 2299 ntBASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
UPF3BQ9BZI7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 AC007613.1-201ENST00000572811 2597 ntBASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 RN7SL471P-201ENST00000580476 299 ntBASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.66■■□□□ 1.22
UPF3BQ9BZI7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 AC093525.10-201ENST00000625130 1569 ntBASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 KRT16P5-201ENST00000455284 522 ntBASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF3BQ9BZI7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
UPF3BQ9BZI7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 Z85996.1-201ENST00000494644 937 ntBASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF3BQ9BZI7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF3BQ9BZI7 TSPY21P-201ENST00000433481 731 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms