Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
RPAP1Q9BWH6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
RPAP1Q9BWH6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RPAP1Q9BWH6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
RPAP1Q9BWH6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RPAP1Q9BWH6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 CA15P1-201ENST00000481698 905 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 YBX1P2-201ENST00000489612 999 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 TEX21P-204ENST00000641479 1693 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 AC004408.2-201ENST00000623613 2777 ntBASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP1Q9BWH6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
RPAP1Q9BWH6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 LINC01465-201ENST00000408887 1940 ntBASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 RNF152P1-201ENST00000397754 604 ntBASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 AC139887.4-201ENST00000607877 719 ntBASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP1Q9BWH6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 TSPY17P-201ENST00000450329 467 ntBASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.03■■□□□ 1.28
RPAP1Q9BWH6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms