Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN18Q99952 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
PTPN18Q99952 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTPN18Q99952 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN18Q99952 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN18Q99952 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN18Q99952 IGHV3-47-201ENST00000425060 335 ntBASIC21.79■■□□□ 1.08
PTPN18Q99952 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPN18Q99952 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPN18Q99952 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.79■■□□□ 1.08
PTPN18Q99952 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.79■■□□□ 1.08
PTPN18Q99952 AL390719.2-201ENST00000606993 987 ntBASIC21.79■■□□□ 1.08
PTPN18Q99952 AC117500.6-201ENST00000624871 588 ntBASIC21.79■■□□□ 1.08
PTPN18Q99952 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN18Q99952 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTPN18Q99952 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN18Q99952 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN18Q99952 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.78■■□□□ 1.08
PTPN18Q99952 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN18Q99952 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PTPN18Q99952 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PTPN18Q99952 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN18Q99952 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.78■■□□□ 1.08
PTPN18Q99952 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN18Q99952 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.78■■□□□ 1.08
PTPN18Q99952 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 IGHV3-41-201ENST00000613121 348 ntBASIC21.78■■□□□ 1.08
PTPN18Q99952 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN18Q99952 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN18Q99952 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN18Q99952 AC073314.1-201ENST00000568729 2216 ntBASIC21.78■■□□□ 1.08
PTPN18Q99952 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.77■■□□□ 1.08
PTPN18Q99952 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PTPN18Q99952 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN18Q99952 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.77■■□□□ 1.08
PTPN18Q99952 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 AF238378.1-201ENST00000526806 358 ntBASIC21.77■■□□□ 1.08
PTPN18Q99952 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.77■■□□□ 1.08
PTPN18Q99952 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.77■■□□□ 1.08
PTPN18Q99952 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PTPN18Q99952 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.77■■□□□ 1.08
PTPN18Q99952 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.77■■□□□ 1.08
PTPN18Q99952 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN18Q99952 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN18Q99952 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN18Q99952 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN18Q99952 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTPN18Q99952 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 PMS2P1-201ENST00000431037 1228 ntBASIC21.76■■□□□ 1.07
PTPN18Q99952 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.76■■□□□ 1.07
PTPN18Q99952 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN18Q99952 KRT8P3-201ENST00000519669 1449 ntBASIC21.76■■□□□ 1.07
PTPN18Q99952 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.76■■□□□ 1.07
PTPN18Q99952 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTPN18Q99952 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.76■■□□□ 1.07
PTPN18Q99952 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.76■■□□□ 1.07
PTPN18Q99952 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTPN18Q99952 IL9RP2-201ENST00000423948 1312 ntBASIC21.76■■□□□ 1.07
PTPN18Q99952 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PTPN18Q99952 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN18Q99952 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms