Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CPNE1Q99829 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE1Q99829 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19■□□□□ 0.63
CPNE1Q99829 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19■□□□□ 0.63
CPNE1Q99829 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19■□□□□ 0.63
CPNE1Q99829 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19■□□□□ 0.63
CPNE1Q99829 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19■□□□□ 0.63
CPNE1Q99829 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19■□□□□ 0.63
CPNE1Q99829 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE1Q99829 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CPNE1Q99829 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE1Q99829 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.99■□□□□ 0.63
CPNE1Q99829 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.99■□□□□ 0.63
CPNE1Q99829 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CPNE1Q99829 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE1Q99829 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE1Q99829 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CPNE1Q99829 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 AL390961.4-201ENST00000623958 2535 ntBASIC18.98■□□□□ 0.63
CPNE1Q99829 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE1Q99829 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE1Q99829 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE1Q99829 MTDHP1-201ENST00000605323 784 ntBASIC18.98■□□□□ 0.63
CPNE1Q99829 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE1Q99829 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.98■□□□□ 0.63
CPNE1Q99829 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE1Q99829 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE1Q99829 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE1Q99829 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CPNE1Q99829 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE1Q99829 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 KRT17P3-201ENST00000420566 1262 ntBASIC18.97■□□□□ 0.63
CPNE1Q99829 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms