Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS1Q99742 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPAS1Q99742 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NPAS1Q99742 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS1Q99742 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.31■□□□□ 0.36
NPAS1Q99742 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPAS1Q99742 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.31■□□□□ 0.36
NPAS1Q99742 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 FP475955.4-201ENST00000623131 1990 ntBASIC17.31■□□□□ 0.36
NPAS1Q99742 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.31■□□□□ 0.36
NPAS1Q99742 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NPAS1Q99742 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS1Q99742 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NPAS1Q99742 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.3■□□□□ 0.36
NPAS1Q99742 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS1Q99742 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.3■□□□□ 0.36
NPAS1Q99742 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.3■□□□□ 0.36
NPAS1Q99742 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.3■□□□□ 0.36
NPAS1Q99742 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NPAS1Q99742 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPAS1Q99742 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS1Q99742 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.29■□□□□ 0.36
NPAS1Q99742 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 UNC93B2-201ENST00000285383 730 ntBASIC17.29■□□□□ 0.36
NPAS1Q99742 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NPAS1Q99742 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 MIR1238-201ENST00000408483 83 ntBASIC17.29■□□□□ 0.36
NPAS1Q99742 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 AC097488.1-201ENST00000507834 756 ntBASIC17.29■□□□□ 0.36
NPAS1Q99742 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 SLC25A1P4-201ENST00000567977 778 ntBASIC17.29■□□□□ 0.36
NPAS1Q99742 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPAS1Q99742 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPAS1Q99742 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NPAS1Q99742 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 BX323043.1-201ENST00000641006 1765 ntBASIC17.28■□□□□ 0.36
NPAS1Q99742 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms