Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC38A3Q99624 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC38A3Q99624 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 AC011558.1-201ENST00000623459 338 ntBASIC18.41■□□□□ 0.54
SLC38A3Q99624 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC38A3Q99624 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A3Q99624 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 AP000523.1-201ENST00000398242 1049 ntBASIC18.4■□□□□ 0.54
SLC38A3Q99624 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SLC38A3Q99624 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A3Q99624 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC38A3Q99624 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
SLC38A3Q99624 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
SLC38A3Q99624 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
SLC38A3Q99624 Z82202.1-201ENST00000623446 1880 ntBASIC18.39■□□□□ 0.54
SLC38A3Q99624 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC38A3Q99624 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
SLC38A3Q99624 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
SLC38A3Q99624 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A3Q99624 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 FAM8A6P-201ENST00000407496 1135 ntBASIC18.39■□□□□ 0.53
SLC38A3Q99624 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 AL023973.1-201ENST00000624619 620 ntBASIC18.39■□□□□ 0.53
SLC38A3Q99624 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A3Q99624 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A3Q99624 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 TREX1-205ENST00000625293 1783 ntBASIC18.39■□□□□ 0.53
SLC38A3Q99624 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A3Q99624 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A3Q99624 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.39■□□□□ 0.53
SLC38A3Q99624 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.38■□□□□ 0.53
SLC38A3Q99624 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.38■□□□□ 0.53
SLC38A3Q99624 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.38■□□□□ 0.53
SLC38A3Q99624 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A3Q99624 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A3Q99624 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms