Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.92■□□□□ 0.14
CCL13Q99616 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.92■□□□□ 0.14
CCL13Q99616 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 MIR1238-201ENST00000408483 83 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 AL390955.1-201ENST00000428694 934 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 MFAP1P1-201ENST00000442257 1255 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 PRSS44-201ENST00000515154 1146 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.92■□□□□ 0.14
CCL13Q99616 CKBP1-201ENST00000565489 1086 ntBASIC15.92■□□□□ 0.14
CCL13Q99616 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.92■□□□□ 0.14
CCL13Q99616 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.92■□□□□ 0.14
CCL13Q99616 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL13Q99616 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCL13Q99616 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.92■□□□□ 0.14
CCL13Q99616 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL13Q99616 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CCL13Q99616 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL13Q99616 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL13Q99616 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL13Q99616 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL13Q99616 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.9■□□□□ 0.14
CCL13Q99616 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL13Q99616 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CCL13Q99616 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.9■□□□□ 0.14
CCL13Q99616 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCL13Q99616 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCL13Q99616 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL13Q99616 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CCL13Q99616 AL161938.1-201ENST00000569833 2180 ntBASIC15.9■□□□□ 0.14
CCL13Q99616 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCL13Q99616 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL13Q99616 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL13Q99616 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL13Q99616 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL13Q99616 FP475955.4-201ENST00000623131 1990 ntBASIC15.89■□□□□ 0.13
CCL13Q99616 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCL13Q99616 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL13Q99616 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL13Q99616 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCL13Q99616 FEM1AP3-201ENST00000403722 1741 ntBASIC15.89■□□□□ 0.13
CCL13Q99616 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL13Q99616 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms