Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
MUC4Q99102 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.88□□□□□ -0.19
MUC4Q99102 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MUC4Q99102 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.88□□□□□ -0.19
MUC4Q99102 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.88□□□□□ -0.19
MUC4Q99102 UBE2SP1-201ENST00000450587 669 ntBASIC13.88□□□□□ -0.19
MUC4Q99102 AC128676.1-201ENST00000454392 318 ntBASIC13.88□□□□□ -0.19
MUC4Q99102 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.88□□□□□ -0.19
MUC4Q99102 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.88□□□□□ -0.19
MUC4Q99102 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.88□□□□□ -0.19
MUC4Q99102 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.88□□□□□ -0.19
MUC4Q99102 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MUC4Q99102 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
MUC4Q99102 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.88□□□□□ -0.19
MUC4Q99102 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.87□□□□□ -0.19
MUC4Q99102 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MUC4Q99102 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.87□□□□□ -0.19
MUC4Q99102 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.87□□□□□ -0.19
MUC4Q99102 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MUC4Q99102 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.86□□□□□ -0.19
MUC4Q99102 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.86□□□□□ -0.19
MUC4Q99102 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.86□□□□□ -0.19
MUC4Q99102 KRT18P21-201ENST00000515767 1272 ntBASIC13.86□□□□□ -0.19
MUC4Q99102 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.86□□□□□ -0.19
MUC4Q99102 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.86□□□□□ -0.19
MUC4Q99102 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
MUC4Q99102 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MUC4Q99102 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.86□□□□□ -0.19
MUC4Q99102 AC018470.1-201ENST00000624790 3129 ntBASIC13.86□□□□□ -0.19
MUC4Q99102 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MUC4Q99102 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.85□□□□□ -0.19
MUC4Q99102 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MUC4Q99102 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MUC4Q99102 AC135050.7-201ENST00000624508 2218 ntBASIC13.85□□□□□ -0.19
MUC4Q99102 KRT18P16-201ENST00000510337 1294 ntBASIC13.85□□□□□ -0.19
MUC4Q99102 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MUC4Q99102 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.85□□□□□ -0.19
MUC4Q99102 AC233263.1-201ENST00000578059 224 ntBASIC13.85□□□□□ -0.19
MUC4Q99102 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MUC4Q99102 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
MUC4Q99102 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
MUC4Q99102 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MUC4Q99102 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms