Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 AC116562.2-201ENST00000507042 360 ntBASIC22.49■■□□□ 1.19
NEK1Q96PY6 NUDT16P1-203ENST00000513809 620 ntBASIC22.49■■□□□ 1.19
NEK1Q96PY6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NEK1Q96PY6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.49■■□□□ 1.19
NEK1Q96PY6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 AP000692.2-201ENST00000608391 879 ntBASIC22.48■■□□□ 1.19
NEK1Q96PY6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NEK1Q96PY6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.48■■□□□ 1.19
NEK1Q96PY6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NEK1Q96PY6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NEK1Q96PY6 AC008550.1-201ENST00000511500 884 ntBASIC22.47■■□□□ 1.19
NEK1Q96PY6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 CKBP1-201ENST00000565489 1086 ntBASIC22.47■■□□□ 1.19
NEK1Q96PY6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NEK1Q96PY6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NEK1Q96PY6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NEK1Q96PY6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
NEK1Q96PY6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 AC083906.6-201ENST00000641366 219 ntBASIC22.46■■□□□ 1.19
NEK1Q96PY6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.46■■□□□ 1.19
NEK1Q96PY6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NEK1Q96PY6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms