Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.59■□□□□ 0.73
RPRD1AQ96P16 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.58■□□□□ 0.73
RPRD1AQ96P16 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 INGX-201ENST00000359239 846 ntBASIC19.58■□□□□ 0.72
RPRD1AQ96P16 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 ECEL1P2-202ENST00000465689 757 ntBASIC19.58■□□□□ 0.72
RPRD1AQ96P16 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 AC120498.9-201ENST00000339021 3867 ntBASIC19.58■□□□□ 0.72
RPRD1AQ96P16 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPRD1AQ96P16 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 TSPY17P-201ENST00000450329 467 ntBASIC19.57■□□□□ 0.72
RPRD1AQ96P16 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 AL023803.3-201ENST00000615559 522 ntBASIC19.57■□□□□ 0.72
RPRD1AQ96P16 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.57■□□□□ 0.72
RPRD1AQ96P16 FEM1AP3-201ENST00000403722 1741 ntBASIC19.56■□□□□ 0.72
RPRD1AQ96P16 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.56■□□□□ 0.72
RPRD1AQ96P16 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 AC092338.2-201ENST00000568827 1415 ntBASIC19.56■□□□□ 0.72
RPRD1AQ96P16 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPRD1AQ96P16 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 FP475955.4-201ENST00000623131 1990 ntBASIC19.55■□□□□ 0.72
RPRD1AQ96P16 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 AC007663.1-201ENST00000438948 1240 ntBASIC19.55■□□□□ 0.72
RPRD1AQ96P16 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 AL353719.1-201ENST00000566847 864 ntBASIC19.55■□□□□ 0.72
RPRD1AQ96P16 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 AC005363.2-201ENST00000618631 242 ntBASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPRD1AQ96P16 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms