Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 NTF6G-201ENST00000591094 616 ntBASIC14.52□□□□□ -0.09
LINC00479Q96M42 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 AC139713.2-201ENST00000641328 2723 ntBASIC14.52□□□□□ -0.09
LINC00479Q96M42 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00479Q96M42 FEM1AP3-201ENST00000403722 1741 ntBASIC14.52□□□□□ -0.09
LINC00479Q96M42 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00479Q96M42 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AC126763.1-201ENST00000552015 2118 ntBASIC14.51□□□□□ -0.09
LINC00479Q96M42 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00479Q96M42 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 KRT17P1-201ENST00000399211 1546 ntBASIC14.51□□□□□ -0.09
LINC00479Q96M42 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00479Q96M42 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00479Q96M42 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00479Q96M42 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms