Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
FOXRED1Q96CU9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 BICD1-207ENST00000551848 1962 ntBASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.52■□□□□ 0.24
FOXRED1Q96CU9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
FOXRED1Q96CU9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 DUSP5P2-201ENST00000426873 1033 ntBASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FOXRED1Q96CU9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 RPS2P52-201ENST00000469610 820 ntBASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 AC091874.3-201ENST00000512672 1195 ntBASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 AC083906.6-201ENST00000641366 219 ntBASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXRED1Q96CU9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms