Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0A1Q93050 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0A1Q93050 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 AC140113.3-201ENST00000605663 199 ntBASIC21.28■■□□□ 1
ATP6V0A1Q93050 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0A1Q93050 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0A1Q93050 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ATP6V0A1Q93050 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP6V0A1Q93050 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP6V0A1Q93050 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 UPK3BP1-201ENST00000428678 509 ntBASIC21.27■■□□□ 1
ATP6V0A1Q93050 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.27■■□□□ 1
ATP6V0A1Q93050 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP6V0A1Q93050 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.27■■□□□ 1
ATP6V0A1Q93050 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6V0A1Q93050 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP6V0A1Q93050 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.27■□□□□ 0.99
ATP6V0A1Q93050 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.27■□□□□ 0.99
ATP6V0A1Q93050 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 TEX21P-204ENST00000641479 1693 ntBASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6V0A1Q93050 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 AL023973.1-201ENST00000624619 620 ntBASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6V0A1Q93050 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 KRT8P45-201ENST00000414328 1447 ntBASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 HOMER2P1-201ENST00000455653 964 ntBASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 AL441883.1-201ENST00000566170 1045 ntBASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
ATP6V0A1Q93050 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP6V0A1Q93050 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6V0A1Q93050 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms