Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
USP6NLQ92738 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.5■■□□□ 1.03
USP6NLQ92738 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6NLQ92738 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
USP6NLQ92738 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 AC009078.2-202ENST00000463353 338 ntBASIC21.5■■□□□ 1.03
USP6NLQ92738 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.5■■□□□ 1.03
USP6NLQ92738 MIR3180-5-201ENST00000583743 153 ntBASIC21.5■■□□□ 1.03
USP6NLQ92738 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
USP6NLQ92738 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6NLQ92738 IFNL4P1-201ENST00000607083 540 ntBASIC21.5■■□□□ 1.03
USP6NLQ92738 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.5■■□□□ 1.03
USP6NLQ92738 AL157888.1-201ENST00000631930 593 ntBASIC21.5■■□□□ 1.03
USP6NLQ92738 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6NLQ92738 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.5■■□□□ 1.03
USP6NLQ92738 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
USP6NLQ92738 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6NLQ92738 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6NLQ92738 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.49■■□□□ 1.03
USP6NLQ92738 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.49■■□□□ 1.03
USP6NLQ92738 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
USP6NLQ92738 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
USP6NLQ92738 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.49■■□□□ 1.03
USP6NLQ92738 EMBP1-201ENST00000458200 901 ntBASIC21.49■■□□□ 1.03
USP6NLQ92738 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.49■■□□□ 1.03
USP6NLQ92738 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
USP6NLQ92738 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
USP6NLQ92738 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 AL391807.1-203ENST00000604392 2365 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6NLQ92738 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
USP6NLQ92738 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.48■■□□□ 1.03
USP6NLQ92738 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 DRAXINP1-201ENST00000437611 948 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.48■■□□□ 1.03
USP6NLQ92738 TPSP2-201ENST00000561760 610 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 MIR3917-201ENST00000580971 93 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6NLQ92738 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.48■■□□□ 1.03
USP6NLQ92738 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6NLQ92738 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 SDHAP1-207ENST00000440850 2000 ntBASIC21.48■■□□□ 1.03
USP6NLQ92738 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.48■■□□□ 1.03
USP6NLQ92738 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP6NLQ92738 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
USP6NLQ92738 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 TSPY22P-201ENST00000427496 604 ntBASIC21.47■■□□□ 1.03
USP6NLQ92738 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.47■■□□□ 1.03
USP6NLQ92738 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.47■■□□□ 1.03
USP6NLQ92738 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.47■■□□□ 1.03
USP6NLQ92738 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.47■■□□□ 1.03
USP6NLQ92738 AL136038.4-201ENST00000603606 1261 ntBASIC21.47■■□□□ 1.03
USP6NLQ92738 AL732292.2-201ENST00000609649 430 ntBASIC21.47■■□□□ 1.03
USP6NLQ92738 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 AL031008.1-201ENST00000619963 541 ntBASIC21.47■■□□□ 1.03
USP6NLQ92738 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
USP6NLQ92738 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP6NLQ92738 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms