Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
DDX1Q92499 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.25■□□□□ 0.83
DDX1Q92499 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.25■□□□□ 0.83
DDX1Q92499 AC026271.3-201ENST00000571884 352 ntBASIC20.25■□□□□ 0.83
DDX1Q92499 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.25■□□□□ 0.83
DDX1Q92499 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.25■□□□□ 0.83
DDX1Q92499 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.25■□□□□ 0.83
DDX1Q92499 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.25■□□□□ 0.83
DDX1Q92499 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
DDX1Q92499 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
DDX1Q92499 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 MESTP1-201ENST00000404287 994 ntBASIC20.24■□□□□ 0.83
DDX1Q92499 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 AC011506.1-201ENST00000474329 610 ntBASIC20.24■□□□□ 0.83
DDX1Q92499 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX1Q92499 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX1Q92499 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.24■□□□□ 0.83
DDX1Q92499 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.24■□□□□ 0.83
DDX1Q92499 AL512353.2-201ENST00000448759 1962 ntBASIC20.24■□□□□ 0.83
DDX1Q92499 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX1Q92499 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.24■□□□□ 0.83
DDX1Q92499 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DDX1Q92499 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX1Q92499 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX1Q92499 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
DDX1Q92499 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX1Q92499 AC004951.3-201ENST00000418645 1148 ntBASIC20.23■□□□□ 0.83
DDX1Q92499 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 TSPY15P-201ENST00000457163 923 ntBASIC20.23■□□□□ 0.83
DDX1Q92499 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.23■□□□□ 0.83
DDX1Q92499 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 AC130371.2-201ENST00000619443 611 ntBASIC20.23■□□□□ 0.83
DDX1Q92499 AL031985.4-201ENST00000642138 673 ntBASIC20.23■□□□□ 0.83
DDX1Q92499 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
DDX1Q92499 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX1Q92499 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.22■□□□□ 0.83
DDX1Q92499 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX1Q92499 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DDX1Q92499 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 MMP23A-201ENST00000234610 1017 ntBASIC20.22■□□□□ 0.83
DDX1Q92499 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX1Q92499 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX1Q92499 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX1Q92499 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
DDX1Q92499 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX1Q92499 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX1Q92499 AC083906.6-201ENST00000641366 219 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms