Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L1Q8WWY6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MBD3L1Q8WWY6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 TFP1-202ENST00000475455 1573 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 MCRIP2P1-201ENST00000394346 511 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AL162412.1-201ENST00000567129 965 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AC100791.3-201ENST00000617619 330 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AC105020.6-201ENST00000621523 1217 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PCDHA12-202ENST00000613593 2588 ntBASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MBD3L1Q8WWY6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.89□□□□□ -0.03
MBD3L1Q8WWY6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms