Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 MFAP1P1-201ENST00000442257 1255 ntBASIC32.54■■■□□ 2.8
TRIM41Q8WV44 PRSS44-201ENST00000515154 1146 ntBASIC32.54■■■□□ 2.8
TRIM41Q8WV44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
TRIM41Q8WV44 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 AL441883.1-201ENST00000566170 1045 ntBASIC32.53■■■□□ 2.8
TRIM41Q8WV44 MIR3197-201ENST00000582241 73 ntBASIC32.53■■■□□ 2.8
TRIM41Q8WV44 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
TRIM41Q8WV44 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 SDHAP1-207ENST00000440850 2000 ntBASIC32.52■■■□□ 2.8
TRIM41Q8WV44 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
TRIM41Q8WV44 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 BID-204ENST00000399767 2129 ntTSL 2 BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
TRIM41Q8WV44 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 AP002469.2-201ENST00000531724 424 ntBASIC32.51■■■□□ 2.79
TRIM41Q8WV44 AL390719.2-201ENST00000606993 987 ntBASIC32.51■■■□□ 2.79
TRIM41Q8WV44 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRIM41Q8WV44 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 HIST1H2APS4-201ENST00000362070 348 ntBASIC32.5■■■□□ 2.79
TRIM41Q8WV44 PPIH-202ENST00000372549 327 ntTSL 3 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 AFG3L1P-217ENST00000557444 2447 ntBASIC32.5■■■□□ 2.79
TRIM41Q8WV44 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRIM41Q8WV44 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 AC239800.4-201ENST00000603712 296 ntBASIC32.49■■■□□ 2.79
TRIM41Q8WV44 AL031432.5-201ENST00000641059 760 ntBASIC32.49■■■□□ 2.79
TRIM41Q8WV44 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRIM41Q8WV44 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 MRPL3P1-201ENST00000400109 1033 ntBASIC32.48■■■□□ 2.79
TRIM41Q8WV44 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 ZNF444P1-201ENST00000559497 298 ntBASIC32.48■■■□□ 2.79
TRIM41Q8WV44 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TRIM41Q8WV44 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC32.47■■■□□ 2.79
TRIM41Q8WV44 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TRIM41Q8WV44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms