Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 LINC01006-201ENST00000333319 2292 ntBASIC23.13■■□□□ 1.29
SNED1Q8TER0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 MCCD1P1-208ENST00000445732 328 ntBASIC23.13■■□□□ 1.29
SNED1Q8TER0 KRT18P31-201ENST00000506277 1292 ntBASIC23.13■■□□□ 1.29
SNED1Q8TER0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 LINC00265-3P-201ENST00000447588 903 ntBASIC23.12■■□□□ 1.29
SNED1Q8TER0 KRT8P3-201ENST00000519669 1449 ntBASIC23.12■■□□□ 1.29
SNED1Q8TER0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
SNED1Q8TER0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SNED1Q8TER0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 AKR1C7P-201ENST00000305623 895 ntBASIC23.11■■□□□ 1.29
SNED1Q8TER0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 MRPL3P1-201ENST00000400109 1033 ntBASIC23.11■■□□□ 1.29
SNED1Q8TER0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SNED1Q8TER0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.11■■□□□ 1.29
SNED1Q8TER0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SNED1Q8TER0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
SNED1Q8TER0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 FOSL1P1-201ENST00000511041 816 ntBASIC23.09■■□□□ 1.29
SNED1Q8TER0 GPALPP1-207ENST00000611650 899 ntBASIC23.09■■□□□ 1.29
SNED1Q8TER0 AC112497.1-201ENST00000624824 639 ntBASIC23.09■■□□□ 1.29
SNED1Q8TER0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SNED1Q8TER0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SNED1Q8TER0 TCF3P1-201ENST00000423021 1937 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms