Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 HLA-B-256ENST00000639848 1089 ntBASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
RPS4Y2Q8TD47 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 TSPY23P-201ENST00000440136 739 ntBASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 AC126763.1-201ENST00000552015 2118 ntBASIC16.63■□□□□ 0.25
RPS4Y2Q8TD47 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 MYC-209ENST00000641252 345 ntBASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RPS4Y2Q8TD47 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AC120498.8-201ENST00000614275 531 ntBASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AC018470.1-201ENST00000624790 3129 ntBASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AC020916.1-201ENST00000587762 1774 ntBASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RPS4Y2Q8TD47 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms