Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 AC111152.3-201ENST00000569699 673 ntBASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF248Q8NDW4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 AL162377.1-201ENST00000618844 1793 ntBASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 HYMAI.1-201ENST00000620949 238 ntBASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF248Q8NDW4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF248Q8NDW4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.14■□□□□ 0.5
ZNF248Q8NDW4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF248Q8NDW4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 TSPY21P-201ENST00000433481 731 ntBASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 TSPY23P-201ENST00000440136 739 ntBASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 FDX1P1-201ENST00000449115 551 ntBASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 AC092119.3-201ENST00000612618 583 ntBASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 NPAP1P7-201ENST00000613027 823 ntBASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF248Q8NDW4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 FAAHP1-202ENST00000446499 1238 ntBASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 GCSHP2-201ENST00000560971 527 ntBASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 AC092329.2-201ENST00000598402 547 ntBASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF248Q8NDW4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms