Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RDH13Q8NBN7 FP475955.4-201ENST00000623131 1990 ntBASIC20.81■□□□□ 0.92
RDH13Q8NBN7 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.81■□□□□ 0.92
RDH13Q8NBN7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
RDH13Q8NBN7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 AL596275.1-201ENST00000423464 877 ntBASIC20.8■□□□□ 0.92
RDH13Q8NBN7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 MIR4497-201ENST00000583208 89 ntBASIC20.8■□□□□ 0.92
RDH13Q8NBN7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RDH13Q8NBN7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RDH13Q8NBN7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 TSPY15P-201ENST00000457163 923 ntBASIC20.78■□□□□ 0.92
RDH13Q8NBN7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 MIR4785-201ENST00000585005 73 ntBASIC20.78■□□□□ 0.92
RDH13Q8NBN7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RDH13Q8NBN7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 SLC25A1P4-201ENST00000567977 778 ntBASIC20.77■□□□□ 0.92
RDH13Q8NBN7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 AP000692.2-201ENST00000608391 879 ntBASIC20.77■□□□□ 0.92
RDH13Q8NBN7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RDH13Q8NBN7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RDH13Q8NBN7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RDH13Q8NBN7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RDH13Q8NBN7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RDH13Q8NBN7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms