Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 FAM8A6P-201ENST00000407496 1135 ntBASIC29.71■■■□□ 2.35
VPS8Q8N3P4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 AL445228.2-201ENST00000605589 952 ntBASIC29.71■■■□□ 2.35
VPS8Q8N3P4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 MTMR9LP-203ENST00000426597 1545 ntBASIC29.71■■■□□ 2.35
VPS8Q8N3P4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 AK4P3-201ENST00000418260 669 ntBASIC29.71■■■□□ 2.35
VPS8Q8N3P4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC29.71■■■□□ 2.35
VPS8Q8N3P4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
VPS8Q8N3P4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 KRT18P35-201ENST00000510488 1269 ntBASIC29.7■■■□□ 2.34
VPS8Q8N3P4 AL049597.2-201ENST00000565575 961 ntBASIC29.7■■■□□ 2.34
VPS8Q8N3P4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
VPS8Q8N3P4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC29.69■■■□□ 2.34
VPS8Q8N3P4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 AC008556.1-201ENST00000610908 2040 ntBASIC29.68■■■□□ 2.34
VPS8Q8N3P4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
VPS8Q8N3P4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 AC011558.1-201ENST00000623459 338 ntBASIC29.67■■■□□ 2.34
VPS8Q8N3P4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC29.67■■■□□ 2.34
VPS8Q8N3P4 HEIH-201ENST00000623091 1652 ntBASIC29.67■■■□□ 2.34
VPS8Q8N3P4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 AP000523.1-201ENST00000398242 1049 ntBASIC29.66■■■□□ 2.34
VPS8Q8N3P4 SPDYE15P-201ENST00000424157 909 ntBASIC29.66■■■□□ 2.34
VPS8Q8N3P4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
VPS8Q8N3P4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
VPS8Q8N3P4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms