Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 KRT8P11-201ENST00000409686 1436 ntBASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 AC142381.4-202ENST00000563973 229 ntBASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF440Q8IYI8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AL138781.2-201ENST00000617896 1843 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC093503.3-201ENST00000624917 2352 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PRORSD1P-201ENST00000295112 541 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 UBE2SP1-201ENST00000450587 669 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC091390.4-202ENST00000476426 537 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 Z98044.1-201ENST00000632503 1764 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 AC004408.2-201ENST00000623613 2777 ntBASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF440Q8IYI8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 AP001412.1-201ENST00000608405 714 ntBASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 AC011298.2-201ENST00000617989 482 ntBASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF440Q8IYI8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms