Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
RP1L1Q8IWN7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 AC004870.1-201ENST00000315132 882 ntBASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.18■□□□□ 0.34
RP1L1Q8IWN7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 AL157384.1-201ENST00000445995 2473 ntBASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 AC112907.2-201ENST00000448639 330 ntBASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 AC104692.2-201ENST00000603054 253 ntBASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RP1L1Q8IWN7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 AL662844.1-201ENST00000546340 181 ntBASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 AL160286.2-201ENST00000567150 934 ntBASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
RP1L1Q8IWN7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AC016734.2-201ENST00000624325 1377 ntBASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms