Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC50Q8IVM0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 IRX1P1-201ENST00000438849 1838 ntBASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 PRKY-204ENST00000533551 1019 ntBASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC50Q8IVM0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 POM121L13P-201ENST00000422362 380 ntBASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 FP475955.4-201ENST00000623131 1990 ntBASIC20.03■□□□□ 0.8
CCDC50Q8IVM0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC50Q8IVM0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 AL138781.2-201ENST00000617896 1843 ntBASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC50Q8IVM0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms