Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71Q8IV32 KRT8P20-201ENST00000423953 1409 ntBASIC17.81■□□□□ 0.44
CCDC71Q8IV32 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71Q8IV32 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 PHGDH-210ENST00000641115 1638 ntBASIC17.8■□□□□ 0.44
CCDC71Q8IV32 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 AC141586.3-201ENST00000562166 1838 ntBASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 AL121829.2-201ENST00000620908 328 ntBASIC17.8■□□□□ 0.44
CCDC71Q8IV32 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC71Q8IV32 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
CCDC71Q8IV32 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AL031598.1-201ENST00000561511 1773 ntBASIC17.79■□□□□ 0.44
CCDC71Q8IV32 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.79■□□□□ 0.44
CCDC71Q8IV32 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AC023632.3-201ENST00000521633 145 ntBASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 AC010331.1-201ENST00000611423 582 ntBASIC17.79■□□□□ 0.44
CCDC71Q8IV32 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC71Q8IV32 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 HTR7P1-201ENST00000538670 1336 ntBASIC17.78■□□□□ 0.44
CCDC71Q8IV32 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71Q8IV32 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms