Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.77■□□□□ 0.27
RTTNQ86VV8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTTNQ86VV8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTTNQ86VV8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RTTNQ86VV8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 AL353807.1-201ENST00000427475 662 ntBASIC16.76■□□□□ 0.27
RTTNQ86VV8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 KSR1P1-201ENST00000446298 240 ntBASIC16.76■□□□□ 0.27
RTTNQ86VV8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 HLA-A-209ENST00000638375 975 ntBASIC16.76■□□□□ 0.27
RTTNQ86VV8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTTNQ86VV8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.76■□□□□ 0.27
RTTNQ86VV8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.75■□□□□ 0.27
RTTNQ86VV8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
RTTNQ86VV8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTTNQ86VV8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 AC113410.3-201ENST00000623366 203 ntBASIC16.74■□□□□ 0.27
RTTNQ86VV8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 HTR7P1-201ENST00000538670 1336 ntBASIC16.74■□□□□ 0.27
RTTNQ86VV8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 AP003071.4-201ENST00000562276 1284 ntBASIC16.74■□□□□ 0.27
RTTNQ86VV8 AF186192.3-201ENST00000583427 947 ntBASIC16.74■□□□□ 0.27
RTTNQ86VV8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTTNQ86VV8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.74■□□□□ 0.27
RTTNQ86VV8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTTNQ86VV8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTTNQ86VV8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms