Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 AC099778.1-201ENST00000568593 1911 ntBASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 AL691432.2-201ENST00000607222 2038 ntBASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 TMEM179-206ENST00000616017 1645 ntBASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 KRT16P1-201ENST00000399124 1418 ntBASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP1BQ7LBR1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 CROCCP1-201ENST00000426910 5675 ntBASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP1BQ7LBR1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.52■□□□□ 0.39
CHMP1BQ7LBR1 AC004408.2-201ENST00000623613 2777 ntBASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 AC009237.14-201ENST00000609975 1594 ntBASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 AC131212.4-201ENST00000623606 975 ntBASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 AL031985.4-201ENST00000642138 673 ntBASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CHMP1BQ7LBR1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 KRT8P8-201ENST00000434750 1448 ntBASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 AP003071.4-201ENST00000562276 1284 ntBASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP1BQ7LBR1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms