Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AL138781.2-201ENST00000617896 1843 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AC026471.5-201ENST00000615068 467 ntBASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
COLCA1Q6ZS62 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 AL355355.2-201ENST00000442321 338 ntBASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 Z98044.1-201ENST00000632503 1764 ntBASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
COLCA1Q6ZS62 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 AL512353.2-201ENST00000448759 1962 ntBASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 KRT8P32-201ENST00000512863 1461 ntBASIC16.35■□□□□ 0.21
COLCA1Q6ZS62 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.34■□□□□ 0.21
COLCA1Q6ZS62 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms