Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 MIR6786-201ENST00000616843 113 ntBASIC17.81■□□□□ 0.44
RTL4Q6ZR62 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 AP000974.1-201ENST00000623909 2387 ntBASIC17.81■□□□□ 0.44
RTL4Q6ZR62 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTL4Q6ZR62 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 MMP23A-201ENST00000234610 1017 ntBASIC17.8■□□□□ 0.44
RTL4Q6ZR62 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTL4Q6ZR62 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 B3GAT3P1-201ENST00000471720 806 ntBASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 DGCR10-201ENST00000609839 495 ntBASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTL4Q6ZR62 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 AC079598.2-202ENST00000546624 1451 ntBASIC17.78■□□□□ 0.44
RTL4Q6ZR62 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 AC087499.1-201ENST00000418141 1075 ntBASIC17.78■□□□□ 0.44
RTL4Q6ZR62 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.78■□□□□ 0.44
RTL4Q6ZR62 AL160286.2-201ENST00000567150 934 ntBASIC17.78■□□□□ 0.44
RTL4Q6ZR62 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms