Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNKSR3Q6P9H4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 KRT8P7-201ENST00000533003 1432 ntBASIC20.43■□□□□ 0.86
CNKSR3Q6P9H4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 KRT18P31-201ENST00000506277 1292 ntBASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNKSR3Q6P9H4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 AC099778.1-201ENST00000568593 1911 ntBASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 KRT18P23-201ENST00000435622 1283 ntBASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 AC079781.3-201ENST00000449110 356 ntBASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 Z83836.1-201ENST00000624605 1642 ntBASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNKSR3Q6P9H4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 AL022342.1-201ENST00000400363 863 ntBASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 AC104819.1-201ENST00000504587 486 ntBASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 AC090616.6-201ENST00000582640 721 ntBASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNKSR3Q6P9H4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms