Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF9Q5VWM5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 AC012618.2-201ENST00000428058 849 ntBASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 AL049637.2-201ENST00000641778 930 ntBASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 AL135905.2-201ENST00000584934 1404 ntBASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF9Q5VWM5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AC116562.2-201ENST00000507042 360 ntBASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AC083906.6-201ENST00000641366 219 ntBASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF9Q5VWM5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 PRSS44-201ENST00000515154 1146 ntBASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF9Q5VWM5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms