Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 AC005332.8-201ENST00000622750 2735 ntBASIC16.82■□□□□ 0.28
ODF4Q2M2E3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ODF4Q2M2E3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 YBX1P10-201ENST00000444752 975 ntBASIC16.81■□□□□ 0.28
ODF4Q2M2E3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ODF4Q2M2E3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 MIR935-201ENST00000401179 91 ntBASIC16.8■□□□□ 0.28
ODF4Q2M2E3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.8■□□□□ 0.28
ODF4Q2M2E3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 AC097658.1-201ENST00000475555 843 ntBASIC16.8■□□□□ 0.28
ODF4Q2M2E3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.8■□□□□ 0.28
ODF4Q2M2E3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 AC005082.1-201ENST00000413042 2259 ntBASIC16.8■□□□□ 0.28
ODF4Q2M2E3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
ODF4Q2M2E3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 GUSBP6-202ENST00000438529 1198 ntBASIC16.79■□□□□ 0.28
ODF4Q2M2E3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 PNMA6B-201ENST00000538162 1200 ntBASIC16.79■□□□□ 0.28
ODF4Q2M2E3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.79■□□□□ 0.28
ODF4Q2M2E3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms