Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.2■□□□□ 0.18
EFNB3Q15768 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.2■□□□□ 0.18
EFNB3Q15768 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 RNF152P1-201ENST00000397754 604 ntBASIC16.2■□□□□ 0.18
EFNB3Q15768 AP000523.1-201ENST00000398242 1049 ntBASIC16.2■□□□□ 0.18
EFNB3Q15768 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.2■□□□□ 0.18
EFNB3Q15768 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
EFNB3Q15768 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.2■□□□□ 0.18
EFNB3Q15768 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.2■□□□□ 0.18
EFNB3Q15768 AC063952.2-201ENST00000498792 1227 ntBASIC16.2■□□□□ 0.18
EFNB3Q15768 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.2■□□□□ 0.18
EFNB3Q15768 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
EFNB3Q15768 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.2■□□□□ 0.18
EFNB3Q15768 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
EFNB3Q15768 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.2■□□□□ 0.18
EFNB3Q15768 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 Z82202.1-201ENST00000623446 1880 ntBASIC16.2■□□□□ 0.18
EFNB3Q15768 AC125437.2-201ENST00000625180 2167 ntBASIC16.2■□□□□ 0.18
EFNB3Q15768 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.2■□□□□ 0.18
EFNB3Q15768 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EFNB3Q15768 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.2■□□□□ 0.18
EFNB3Q15768 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.19■□□□□ 0.18
EFNB3Q15768 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
EFNB3Q15768 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.19■□□□□ 0.18
EFNB3Q15768 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.19■□□□□ 0.18
EFNB3Q15768 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.19■□□□□ 0.18
EFNB3Q15768 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
EFNB3Q15768 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.19■□□□□ 0.18
EFNB3Q15768 YBX1P2-201ENST00000489612 999 ntBASIC16.19■□□□□ 0.18
EFNB3Q15768 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.19■□□□□ 0.18
EFNB3Q15768 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.19■□□□□ 0.18
EFNB3Q15768 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.19■□□□□ 0.18
EFNB3Q15768 AC139887.4-201ENST00000607877 719 ntBASIC16.19■□□□□ 0.18
EFNB3Q15768 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.19■□□□□ 0.18
EFNB3Q15768 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EFNB3Q15768 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
EFNB3Q15768 KRT8P45-201ENST00000414328 1447 ntBASIC16.19■□□□□ 0.18
EFNB3Q15768 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
EFNB3Q15768 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
EFNB3Q15768 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
EFNB3Q15768 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.18■□□□□ 0.18
EFNB3Q15768 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.18■□□□□ 0.18
EFNB3Q15768 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 ARMC10P1-201ENST00000313754 855 ntBASIC16.18■□□□□ 0.18
EFNB3Q15768 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.18■□□□□ 0.18
EFNB3Q15768 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.18■□□□□ 0.18
EFNB3Q15768 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 AC022616.7-201ENST00000525383 220 ntBASIC16.18■□□□□ 0.18
EFNB3Q15768 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.18■□□□□ 0.18
EFNB3Q15768 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.18■□□□□ 0.18
EFNB3Q15768 NEK4P2-201ENST00000580004 1012 ntBASIC16.18■□□□□ 0.18
EFNB3Q15768 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
EFNB3Q15768 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
EFNB3Q15768 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.18■□□□□ 0.18
EFNB3Q15768 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EFNB3Q15768 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFNB3Q15768 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFNB3Q15768 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.17■□□□□ 0.18
EFNB3Q15768 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EFNB3Q15768 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFNB3Q15768 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.17■□□□□ 0.18
EFNB3Q15768 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EFNB3Q15768 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.17■□□□□ 0.18
EFNB3Q15768 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms