Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
GABREP78334 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.05■□□□□ 0.48
GABREP78334 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 AC024243.1-201ENST00000609234 778 ntBASIC18.05■□□□□ 0.48
GABREP78334 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.05■□□□□ 0.48
GABREP78334 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.05■□□□□ 0.48
GABREP78334 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.05■□□□□ 0.48
GABREP78334 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
GABREP78334 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GABREP78334 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
GABREP78334 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.04■□□□□ 0.48
GABREP78334 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.04■□□□□ 0.48
GABREP78334 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
GABREP78334 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.04■□□□□ 0.48
GABREP78334 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.04■□□□□ 0.48
GABREP78334 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.04■□□□□ 0.48
GABREP78334 MIR3180-1-201ENST00000580374 94 ntBASIC18.04■□□□□ 0.48
GABREP78334 MIR3180-3-201ENST00000584616 94 ntBASIC18.04■□□□□ 0.48
GABREP78334 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.04■□□□□ 0.48
GABREP78334 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GABREP78334 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.04■□□□□ 0.48
GABREP78334 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GABREP78334 AC020907.5-201ENST00000624372 1936 ntBASIC18.04■□□□□ 0.48
GABREP78334 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
GABREP78334 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
GABREP78334 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 KRT17P6-201ENST00000453795 1220 ntBASIC18.03■□□□□ 0.48
GABREP78334 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.03■□□□□ 0.48
GABREP78334 UNC93B7-201ENST00000509439 705 ntBASIC18.03■□□□□ 0.48
GABREP78334 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.03■□□□□ 0.48
GABREP78334 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.03■□□□□ 0.48
GABREP78334 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.03■□□□□ 0.48
GABREP78334 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.03■□□□□ 0.48
GABREP78334 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 AP002414.4-201ENST00000589764 1148 ntBASIC18.03■□□□□ 0.48
GABREP78334 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GABREP78334 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
GABREP78334 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.03■□□□□ 0.48
GABREP78334 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GABREP78334 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.02■□□□□ 0.48
GABREP78334 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GABREP78334 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GABREP78334 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.02■□□□□ 0.48
GABREP78334 PVRIG2P-201ENST00000435460 978 ntBASIC18.02■□□□□ 0.48
GABREP78334 AP000347.1-202ENST00000435868 847 ntBASIC18.02■□□□□ 0.48
GABREP78334 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms