Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RCC2P6-201ENST00000526625 1557 ntBASIC18.55■□□□□ 0.56
YBX1P67809 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.54■□□□□ 0.56
YBX1P67809 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.54■□□□□ 0.56
YBX1P67809 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.54■□□□□ 0.56
YBX1P67809 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
YBX1P67809 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YBX1P67809 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 AC005082.1-201ENST00000413042 2259 ntBASIC18.53■□□□□ 0.56
YBX1P67809 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.53■□□□□ 0.56
YBX1P67809 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
YBX1P67809 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
YBX1P67809 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.53■□□□□ 0.56
YBX1P67809 B3GAT3P1-201ENST00000471720 806 ntBASIC18.53■□□□□ 0.56
YBX1P67809 AC091390.4-202ENST00000476426 537 ntBASIC18.53■□□□□ 0.56
YBX1P67809 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.53■□□□□ 0.56
YBX1P67809 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 AL355075.4-201ENST00000554988 638 ntBASIC18.53■□□□□ 0.56
YBX1P67809 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.53■□□□□ 0.56
YBX1P67809 AC005332.8-201ENST00000622750 2735 ntBASIC18.53■□□□□ 0.56
YBX1P67809 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.53■□□□□ 0.56
YBX1P67809 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
YBX1P67809 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
YBX1P67809 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YBX1P67809 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.52■□□□□ 0.56
YBX1P67809 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YBX1P67809 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YBX1P67809 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
YBX1P67809 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.52■□□□□ 0.56
YBX1P67809 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.52■□□□□ 0.56
YBX1P67809 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
YBX1P67809 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.52■□□□□ 0.56
YBX1P67809 AL355355.2-201ENST00000442321 338 ntBASIC18.52■□□□□ 0.56
YBX1P67809 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
YBX1P67809 AC116562.2-201ENST00000507042 360 ntBASIC18.52■□□□□ 0.56
YBX1P67809 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.52■□□□□ 0.56
YBX1P67809 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
YBX1P67809 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.52■□□□□ 0.56
YBX1P67809 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.52■□□□□ 0.56
YBX1P67809 MIR6786-201ENST00000616843 113 ntBASIC18.52■□□□□ 0.56
YBX1P67809 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.52■□□□□ 0.56
YBX1P67809 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
YBX1P67809 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.52■□□□□ 0.55
YBX1P67809 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
YBX1P67809 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
YBX1P67809 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YBX1P67809 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
YBX1P67809 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.52■□□□□ 0.55
YBX1P67809 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
YBX1P67809 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
YBX1P67809 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
YBX1P67809 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.51■□□□□ 0.55
YBX1P67809 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.51■□□□□ 0.55
YBX1P67809 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.51■□□□□ 0.55
YBX1P67809 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.51■□□□□ 0.55
YBX1P67809 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.51■□□□□ 0.55
YBX1P67809 AC130371.2-201ENST00000619443 611 ntBASIC18.51■□□□□ 0.55
YBX1P67809 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.51■□□□□ 0.55
YBX1P67809 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
YBX1P67809 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
YBX1P67809 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms