Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNRPFP62306 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 AL512353.2-201ENST00000448759 1962 ntBASIC20.67■□□□□ 0.9
SNRPFP62306 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRPFP62306 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRPFP62306 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.67■□□□□ 0.9
SNRPFP62306 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SNRPFP62306 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.67■□□□□ 0.9
SNRPFP62306 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.67■□□□□ 0.9
SNRPFP62306 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNRPFP62306 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNRPFP62306 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 TNXA-203ENST00000507684 2038 ntBASIC20.66■□□□□ 0.9
SNRPFP62306 AC098818.2-201ENST00000564925 2320 ntBASIC20.66■□□□□ 0.9
SNRPFP62306 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPFP62306 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.66■□□□□ 0.9
SNRPFP62306 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPFP62306 AL596275.1-201ENST00000423464 877 ntBASIC20.66■□□□□ 0.9
SNRPFP62306 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPFP62306 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPFP62306 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SNRPFP62306 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNRPFP62306 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
SNRPFP62306 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SNRPFP62306 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.66■□□□□ 0.9
SNRPFP62306 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SNRPFP62306 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.65■□□□□ 0.9
SNRPFP62306 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.65■□□□□ 0.9
SNRPFP62306 AP000525.1-201ENST00000608286 694 ntBASIC20.65■□□□□ 0.9
SNRPFP62306 AC068587.9-201ENST00000641814 219 ntBASIC20.65■□□□□ 0.9
SNRPFP62306 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SNRPFP62306 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNRPFP62306 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SNRPFP62306 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.65■□□□□ 0.9
SNRPFP62306 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SNRPFP62306 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.64■□□□□ 0.9
SNRPFP62306 HEIH-201ENST00000623091 1652 ntBASIC20.64■□□□□ 0.9
SNRPFP62306 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNRPFP62306 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPFP62306 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPFP62306 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPFP62306 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPFP62306 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNRPFP62306 TSPY17P-201ENST00000450329 467 ntBASIC20.64■□□□□ 0.89
SNRPFP62306 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.64■□□□□ 0.89
SNRPFP62306 AL023803.3-201ENST00000615559 522 ntBASIC20.64■□□□□ 0.89
SNRPFP62306 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.64■□□□□ 0.89
SNRPFP62306 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.64■□□□□ 0.89
SNRPFP62306 CROCCP3-202ENST00000420820 1947 ntBASIC20.64■□□□□ 0.89
SNRPFP62306 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.64■□□□□ 0.89
SNRPFP62306 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.63■□□□□ 0.89
SNRPFP62306 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.63■□□□□ 0.89
SNRPFP62306 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNRPFP62306 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms