Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBE2NP61088 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.72■□□□□ 0.27
UBE2NP61088 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2NP61088 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2NP61088 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2NP61088 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.72■□□□□ 0.27
UBE2NP61088 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2NP61088 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBE2NP61088 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
UBE2NP61088 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 HTR7P1-202ENST00000624664 4411 ntBASIC16.71■□□□□ 0.27
UBE2NP61088 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.71■□□□□ 0.27
UBE2NP61088 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.71■□□□□ 0.27
UBE2NP61088 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 NAPSB-206ENST00000562112 1266 ntBASIC16.71■□□□□ 0.27
UBE2NP61088 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.71■□□□□ 0.27
UBE2NP61088 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.71■□□□□ 0.27
UBE2NP61088 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.71■□□□□ 0.27
UBE2NP61088 AC096733.2-201ENST00000609937 1394 ntBASIC16.71■□□□□ 0.27
UBE2NP61088 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.71■□□□□ 0.27
UBE2NP61088 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.71■□□□□ 0.27
UBE2NP61088 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBE2NP61088 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.71■□□□□ 0.26
UBE2NP61088 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBE2NP61088 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
UBE2NP61088 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 KRT8P11-201ENST00000409686 1436 ntBASIC16.7■□□□□ 0.26
UBE2NP61088 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.7■□□□□ 0.26
UBE2NP61088 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBE2NP61088 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.7■□□□□ 0.26
UBE2NP61088 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 AC087499.1-201ENST00000418141 1075 ntBASIC16.7■□□□□ 0.26
UBE2NP61088 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 CKBP1-201ENST00000565489 1086 ntBASIC16.7■□□□□ 0.26
UBE2NP61088 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.7■□□□□ 0.26
UBE2NP61088 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.7■□□□□ 0.26
UBE2NP61088 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBE2NP61088 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.7■□□□□ 0.26
UBE2NP61088 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
UBE2NP61088 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBE2NP61088 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBE2NP61088 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBE2NP61088 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
UBE2NP61088 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
UBE2NP61088 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
UBE2NP61088 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.69■□□□□ 0.26
UBE2NP61088 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.69■□□□□ 0.26
UBE2NP61088 AC133561.5-201ENST00000635547 218 ntBASIC16.69■□□□□ 0.26
UBE2NP61088 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBE2NP61088 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2NP61088 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.69■□□□□ 0.26
UBE2NP61088 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2NP61088 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2NP61088 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UBE2NP61088 AC093484.2-201ENST00000580996 2166 ntBASIC16.68■□□□□ 0.26
UBE2NP61088 AC020763.4-201ENST00000623414 4170 ntBASIC16.68■□□□□ 0.26
UBE2NP61088 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UBE2NP61088 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBE2NP61088 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.68■□□□□ 0.26
UBE2NP61088 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms