Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.18□□□□□ -0.14
CMC4P56277 EGLN1P1-201ENST00000531623 762 ntBASIC14.18□□□□□ -0.14
CMC4P56277 BX088651.1-201ENST00000540551 451 ntBASIC14.18□□□□□ -0.14
CMC4P56277 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.18□□□□□ -0.14
CMC4P56277 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
CMC4P56277 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CMC4P56277 FP475955.4-201ENST00000623131 1990 ntBASIC14.18□□□□□ -0.14
CMC4P56277 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMC4P56277 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CMC4P56277 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CMC4P56277 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CMC4P56277 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.17□□□□□ -0.14
CMC4P56277 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.17□□□□□ -0.14
CMC4P56277 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.17□□□□□ -0.14
CMC4P56277 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CMC4P56277 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.17□□□□□ -0.14
CMC4P56277 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CMC4P56277 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMC4P56277 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.16□□□□□ -0.14
CMC4P56277 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.16□□□□□ -0.14
CMC4P56277 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 AC008040.2-201ENST00000461049 708 ntBASIC14.16□□□□□ -0.14
CMC4P56277 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.16□□□□□ -0.14
CMC4P56277 AP000525.1-201ENST00000608286 694 ntBASIC14.16□□□□□ -0.14
CMC4P56277 AC010653.2-201ENST00000623505 997 ntBASIC14.16□□□□□ -0.14
CMC4P56277 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CMC4P56277 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 AC079598.2-202ENST00000546624 1451 ntBASIC14.16□□□□□ -0.14
CMC4P56277 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CMC4P56277 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMC4P56277 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.15□□□□□ -0.14
CMC4P56277 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CMC4P56277 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.15□□□□□ -0.14
CMC4P56277 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CMC4P56277 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CMC4P56277 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms