Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOC4P55056 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 SDHAP1-207ENST00000440850 2000 ntBASIC13.93□□□□□ -0.18
APOC4P55056 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOC4P55056 AC073508.3-201ENST00000619697 1419 ntBASIC13.93□□□□□ -0.18
APOC4P55056 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC4P55056 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC4P55056 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC4P55056 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC4P55056 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC4P55056 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
APOC4P55056 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC4P55056 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC4P55056 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
APOC4P55056 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 INGX-201ENST00000359239 846 ntBASIC13.92□□□□□ -0.18
APOC4P55056 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.92□□□□□ -0.18
APOC4P55056 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC4P55056 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.92□□□□□ -0.18
APOC4P55056 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.92□□□□□ -0.18
APOC4P55056 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC4P55056 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
APOC4P55056 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC4P55056 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
APOC4P55056 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC4P55056 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC4P55056 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC4P55056 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
APOC4P55056 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.91□□□□□ -0.18
APOC4P55056 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 AK4P3-201ENST00000418260 669 ntBASIC13.91□□□□□ -0.18
APOC4P55056 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
APOC4P55056 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.91□□□□□ -0.18
APOC4P55056 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 AC092647.4-201ENST00000457211 535 ntBASIC13.91□□□□□ -0.18
APOC4P55056 COX11P1-201ENST00000489116 835 ntBASIC13.91□□□□□ -0.18
APOC4P55056 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC4P55056 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC4P55056 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC4P55056 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC4P55056 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 AC140113.3-201ENST00000605663 199 ntBASIC13.91□□□□□ -0.18
APOC4P55056 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC4P55056 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms