Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COPAP53621 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPAP53621 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.58■□□□□ 0.73
COPAP53621 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.58■□□□□ 0.73
COPAP53621 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COPAP53621 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPAP53621 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.58■□□□□ 0.73
COPAP53621 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPAP53621 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
COPAP53621 ARMC10P1-201ENST00000313754 855 ntBASIC19.58■□□□□ 0.72
COPAP53621 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 MFAP1P1-201ENST00000442257 1255 ntBASIC19.58■□□□□ 0.72
COPAP53621 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.58■□□□□ 0.72
COPAP53621 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
COPAP53621 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.58■□□□□ 0.72
COPAP53621 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPAP53621 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.58■□□□□ 0.72
COPAP53621 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPAP53621 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
COPAP53621 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.58■□□□□ 0.72
COPAP53621 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.58■□□□□ 0.72
COPAP53621 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
COPAP53621 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.57■□□□□ 0.72
COPAP53621 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 AC128688.1-201ENST00000487626 519 ntBASIC19.57■□□□□ 0.72
COPAP53621 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.57■□□□□ 0.72
COPAP53621 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.57■□□□□ 0.72
COPAP53621 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.57■□□□□ 0.72
COPAP53621 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.57■□□□□ 0.72
COPAP53621 AC093484.2-201ENST00000580996 2166 ntBASIC19.57■□□□□ 0.72
COPAP53621 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPAP53621 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COPAP53621 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.56■□□□□ 0.72
COPAP53621 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
COPAP53621 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COPAP53621 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COPAP53621 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 AL691432.2-201ENST00000607222 2038 ntBASIC19.56■□□□□ 0.72
COPAP53621 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.56■□□□□ 0.72
COPAP53621 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 DUX4L26-201ENST00000489078 1255 ntBASIC19.56■□□□□ 0.72
COPAP53621 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.56■□□□□ 0.72
COPAP53621 AC006011.2-201ENST00000621313 1158 ntBASIC19.56■□□□□ 0.72
COPAP53621 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COPAP53621 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPAP53621 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
COPAP53621 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COPAP53621 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.55■□□□□ 0.72
COPAP53621 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COPAP53621 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.55■□□□□ 0.72
COPAP53621 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.55■□□□□ 0.72
COPAP53621 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COPAP53621 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.55■□□□□ 0.72
COPAP53621 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.55■□□□□ 0.72
COPAP53621 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COPAP53621 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms