Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.11□□□□□ -0.31
RPL13AP40429 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 BX119927.1-201ENST00000636596 1552 ntBASIC13.11□□□□□ -0.31
RPL13AP40429 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 AC099398.1-201ENST00000567919 2776 ntBASIC13.1□□□□□ -0.31
RPL13AP40429 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 AC068880.1-201ENST00000507289 2297 ntBASIC13.1□□□□□ -0.31
RPL13AP40429 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 MKRN4P-201ENST00000444706 1521 ntBASIC13.1□□□□□ -0.31
RPL13AP40429 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RPL13AP40429 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.1□□□□□ -0.31
RPL13AP40429 IGHV3-19-201ENST00000521488 291 ntBASIC13.1□□□□□ -0.31
RPL13AP40429 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.1□□□□□ -0.31
RPL13AP40429 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RPL13AP40429 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RPL13AP40429 AL139384.1-201ENST00000612143 3047 ntBASIC13.1□□□□□ -0.31
RPL13AP40429 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RPL13AP40429 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.1□□□□□ -0.31
RPL13AP40429 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 TNRC18P3-201ENST00000441896 2691 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 DPP3P2-201ENST00000416030 1696 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.09□□□□□ -0.31
RPL13AP40429 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.09□□□□□ -0.31
RPL13AP40429 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RPL13AP40429 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 ZNRF2P3-201ENST00000424200 374 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 SLC47A1P1-202ENST00000449666 945 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 AP005435.1-201ENST00000529293 1178 ntBASIC13.09□□□□□ -0.31
RPL13AP40429 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RPL13AP40429 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
RPL13AP40429 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RPL13AP40429 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms