Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RFC1P35251 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.03■□□□□ 0.8
RFC1P35251 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.03■□□□□ 0.8
RFC1P35251 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.03■□□□□ 0.8
RFC1P35251 TMEM191A-211ENST00000637163 1067 ntBASIC20.03■□□□□ 0.8
RFC1P35251 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RFC1P35251 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
RFC1P35251 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RFC1P35251 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC1P35251 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 AC091390.4-202ENST00000476426 537 ntBASIC20.02■□□□□ 0.8
RFC1P35251 AL031985.4-201ENST00000642138 673 ntBASIC20.02■□□□□ 0.8
RFC1P35251 RCC2P6-201ENST00000526625 1557 ntBASIC20.02■□□□□ 0.8
RFC1P35251 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFC1P35251 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFC1P35251 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.02■□□□□ 0.8
RFC1P35251 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC1P35251 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.02■□□□□ 0.79
RFC1P35251 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RFC1P35251 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC1P35251 AL135905.2-201ENST00000584934 1404 ntBASIC20.02■□□□□ 0.79
RFC1P35251 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.02■□□□□ 0.79
RFC1P35251 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFC1P35251 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFC1P35251 RPS2P55-201ENST00000397318 883 ntBASIC20.01■□□□□ 0.79
RFC1P35251 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.01■□□□□ 0.79
RFC1P35251 FAM197Y1-201ENST00000421178 764 ntBASIC20.01■□□□□ 0.79
RFC1P35251 AC107956.1-201ENST00000494359 873 ntBASIC20.01■□□□□ 0.79
RFC1P35251 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.01■□□□□ 0.79
RFC1P35251 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.01■□□□□ 0.79
RFC1P35251 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 KRT8P11-201ENST00000409686 1436 ntBASIC20.01■□□□□ 0.79
RFC1P35251 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 AL020996.1-203ENST00000536896 2307 ntBASIC20.01■□□□□ 0.79
RFC1P35251 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC1P35251 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFC1P35251 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 HCG11-201ENST00000411553 5696 ntBASIC20■□□□□ 0.79
RFC1P35251 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20■□□□□ 0.79
RFC1P35251 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 AC008040.2-201ENST00000461049 708 ntBASIC20■□□□□ 0.79
RFC1P35251 AC011506.1-201ENST00000474329 610 ntBASIC20■□□□□ 0.79
RFC1P35251 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20■□□□□ 0.79
RFC1P35251 CD177P1-201ENST00000606252 935 ntBASIC20■□□□□ 0.79
RFC1P35251 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20■□□□□ 0.79
RFC1P35251 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
RFC1P35251 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC1P35251 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFC1P35251 CROCCP3-202ENST00000420820 1947 ntBASIC20■□□□□ 0.79
RFC1P35251 MME-217ENST00000616757 1315 ntTSL 5 BASIC20■□□□□ 0.79
RFC1P35251 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFC1P35251 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC1P35251 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RFC1P35251 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC1P35251 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.99■□□□□ 0.79
RFC1P35251 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms