Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN3P20807 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN3P20807 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPN3P20807 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.29■□□□□ 0.52
CAPN3P20807 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CAPN3P20807 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 AC073648.6-201ENST00000641589 218 ntBASIC18.29■□□□□ 0.52
CAPN3P20807 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CAPN3P20807 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CAPN3P20807 ANO7L1-203ENST00000602586 1720 ntBASIC18.29■□□□□ 0.52
CAPN3P20807 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPN3P20807 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CAPN3P20807 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
CAPN3P20807 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPN3P20807 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CAPN3P20807 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN3P20807 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN3P20807 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN3P20807 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN3P20807 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN3P20807 AP003097.1-201ENST00000530657 1135 ntBASIC18.28■□□□□ 0.52
CAPN3P20807 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CAPN3P20807 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN3P20807 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN3P20807 MIR4497-201ENST00000583208 89 ntBASIC18.28■□□□□ 0.52
CAPN3P20807 NOC2LP1-202ENST00000452600 2235 ntBASIC18.28■□□□□ 0.52
CAPN3P20807 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN3P20807 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.28■□□□□ 0.52
CAPN3P20807 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPN3P20807 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPN3P20807 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPN3P20807 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN3P20807 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CAPN3P20807 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 ECEL1P3-201ENST00000427961 737 ntBASIC18.27■□□□□ 0.52
CAPN3P20807 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CAPN3P20807 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN3P20807 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN3P20807 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CAPN3P20807 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CAPN3P20807 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN3P20807 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.27■□□□□ 0.51
CAPN3P20807 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN3P20807 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CAPN3P20807 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN3P20807 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.27■□□□□ 0.51
CAPN3P20807 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CAPN3P20807 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CAPN3P20807 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN3P20807 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CAPN3P20807 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.26■□□□□ 0.51
CAPN3P20807 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.26■□□□□ 0.51
CAPN3P20807 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 LINC01023-201ENST00000606054 436 ntBASIC18.26■□□□□ 0.51
CAPN3P20807 AC010331.1-201ENST00000611423 582 ntBASIC18.26■□□□□ 0.51
CAPN3P20807 REXO1L12P-201ENST00000622156 912 ntBASIC18.26■□□□□ 0.51
CAPN3P20807 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms