Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.69■□□□□ 0.1
CCL3L1P16619 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 AL390955.1-201ENST00000428694 934 ntBASIC15.69■□□□□ 0.1
CCL3L1P16619 MFAP1P1-201ENST00000442257 1255 ntBASIC15.69■□□□□ 0.1
CCL3L1P16619 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 PRSS44-201ENST00000515154 1146 ntBASIC15.69■□□□□ 0.1
CCL3L1P16619 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL3L1P16619 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL3L1P16619 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL3L1P16619 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CCL3L1P16619 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCL3L1P16619 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL3L1P16619 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.68■□□□□ 0.1
CCL3L1P16619 FEM1AP3-201ENST00000403722 1741 ntBASIC15.68■□□□□ 0.1
CCL3L1P16619 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CCL3L1P16619 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCL3L1P16619 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL3L1P16619 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CCL3L1P16619 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.68■□□□□ 0.1
CCL3L1P16619 MIR1238-201ENST00000408483 83 ntBASIC15.68■□□□□ 0.1
CCL3L1P16619 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL3L1P16619 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL3L1P16619 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL3L1P16619 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 CKBP1-201ENST00000565489 1086 ntBASIC15.68■□□□□ 0.1
CCL3L1P16619 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CCL3L1P16619 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL3L1P16619 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL3L1P16619 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL3L1P16619 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL3L1P16619 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.67■□□□□ 0.1
CCL3L1P16619 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL3L1P16619 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.67■□□□□ 0.1
CCL3L1P16619 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL3L1P16619 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL3L1P16619 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL3L1P16619 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms