Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 NSUN5P1-202ENST00000421140 1535 ntBASIC15.56■□□□□ 0.08
ACANP16112 NSUN5P2-203ENST00000457352 1529 ntBASIC15.56■□□□□ 0.08
ACANP16112 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ACANP16112 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.56■□□□□ 0.08
ACANP16112 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.56■□□□□ 0.08
ACANP16112 AC145285.3-201ENST00000564603 959 ntBASIC15.56■□□□□ 0.08
ACANP16112 AC106730.1-201ENST00000566722 1090 ntBASIC15.56■□□□□ 0.08
ACANP16112 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACANP16112 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACANP16112 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ACANP16112 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.55■□□□□ 0.08
ACANP16112 IGHV3-22-201ENST00000520721 359 ntBASIC15.55■□□□□ 0.08
ACANP16112 AC090616.6-201ENST00000582640 721 ntBASIC15.55■□□□□ 0.08
ACANP16112 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.55■□□□□ 0.08
ACANP16112 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.55■□□□□ 0.08
ACANP16112 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ACANP16112 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 AC098831.1-202ENST00000438821 336 ntBASIC15.55■□□□□ 0.08
ACANP16112 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.55■□□□□ 0.08
ACANP16112 AC004967.1-201ENST00000453589 447 ntBASIC15.55■□□□□ 0.08
ACANP16112 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.55■□□□□ 0.08
ACANP16112 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.55■□□□□ 0.08
ACANP16112 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.55■□□□□ 0.08
ACANP16112 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.55■□□□□ 0.08
ACANP16112 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACANP16112 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.55■□□□□ 0.08
ACANP16112 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ACANP16112 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.54■□□□□ 0.08
ACANP16112 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.54■□□□□ 0.08
ACANP16112 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
ACANP16112 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 AC134684.3-201ENST00000641758 218 ntBASIC15.54■□□□□ 0.08
ACANP16112 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.54■□□□□ 0.08
ACANP16112 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 RPSAP43-201ENST00000402237 625 ntBASIC15.54■□□□□ 0.08
ACANP16112 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 HNRNPDP1-201ENST00000439535 754 ntBASIC15.54■□□□□ 0.08
ACANP16112 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.54■□□□□ 0.08
ACANP16112 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.54■□□□□ 0.08
ACANP16112 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.54■□□□□ 0.08
ACANP16112 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACANP16112 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms