Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC026471.1-201ENST00000564629 3026 ntBASIC18.52■□□□□ 0.55
PCNAP12004 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.52■□□□□ 0.55
PCNAP12004 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PCNAP12004 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCNAP12004 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.51■□□□□ 0.55
PCNAP12004 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.51■□□□□ 0.55
PCNAP12004 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.51■□□□□ 0.55
PCNAP12004 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.51■□□□□ 0.55
PCNAP12004 HLA-A-209ENST00000638375 975 ntBASIC18.51■□□□□ 0.55
PCNAP12004 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCNAP12004 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNAP12004 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
PCNAP12004 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNAP12004 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCNAP12004 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.5■□□□□ 0.55
PCNAP12004 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCNAP12004 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNAP12004 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNAP12004 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
PCNAP12004 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNAP12004 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCNAP12004 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNAP12004 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCNAP12004 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNAP12004 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 AL161938.1-201ENST00000569833 2180 ntBASIC18.49■□□□□ 0.55
PCNAP12004 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 KRT18P29-201ENST00000397031 1267 ntBASIC18.49■□□□□ 0.55
PCNAP12004 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 AC133681.1-201ENST00000465482 601 ntBASIC18.49■□□□□ 0.55
PCNAP12004 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.49■□□□□ 0.55
PCNAP12004 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.49■□□□□ 0.55
PCNAP12004 AL160286.2-201ENST00000567150 934 ntBASIC18.49■□□□□ 0.55
PCNAP12004 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 BCL2-203ENST00000589955 5011 ntBASIC18.49■□□□□ 0.55
PCNAP12004 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNAP12004 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.49■□□□□ 0.55
PCNAP12004 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCNAP12004 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.48■□□□□ 0.55
PCNAP12004 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNAP12004 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCNAP12004 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCNAP12004 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.48■□□□□ 0.55
PCNAP12004 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNAP12004 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.48■□□□□ 0.55
PCNAP12004 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNAP12004 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.48■□□□□ 0.55
PCNAP12004 FAM197Y4-202ENST00000622692 608 ntBASIC18.48■□□□□ 0.55
PCNAP12004 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms