Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRAP04437 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRAP04437 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 AC020916.1-201ENST00000587762 1774 ntBASIC14.47□□□□□ -0.09
TCRAP04437 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
TCRAP04437 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRAP04437 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 AC007322.1-201ENST00000426983 750 ntBASIC14.47□□□□□ -0.09
TCRAP04437 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 AC093787.1-201ENST00000450396 207 ntBASIC14.47□□□□□ -0.09
TCRAP04437 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.47□□□□□ -0.09
TCRAP04437 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRAP04437 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRAP04437 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRAP04437 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TCRAP04437 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 YBX1P10-201ENST00000444752 975 ntBASIC14.46□□□□□ -0.09
TCRAP04437 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.46□□□□□ -0.09
TCRAP04437 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.46□□□□□ -0.09
TCRAP04437 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TCRAP04437 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRAP04437 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TCRAP04437 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 OR6D1P-202ENST00000641007 5290 ntBASIC14.46□□□□□ -0.09
TCRAP04437 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TCRAP04437 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRAP04437 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TCRAP04437 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TCRAP04437 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
TCRAP04437 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
TCRAP04437 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.46□□□□□ -0.1
TCRAP04437 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TCRAP04437 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TCRAP04437 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
TCRAP04437 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRAP04437 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms