Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MYCNP04198 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MYCNP04198 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC21.69■■□□□ 1.06
MYCNP04198 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
MYCNP04198 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.69■■□□□ 1.06
MYCNP04198 RWDD4P1-201ENST00000488019 565 ntBASIC21.69■■□□□ 1.06
MYCNP04198 PRSS44-201ENST00000515154 1146 ntBASIC21.69■■□□□ 1.06
MYCNP04198 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC21.69■■□□□ 1.06
MYCNP04198 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.69■■□□□ 1.06
MYCNP04198 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.69■■□□□ 1.06
MYCNP04198 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MYCNP04198 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.69■■□□□ 1.06
MYCNP04198 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MYCNP04198 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.69■■□□□ 1.06
MYCNP04198 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.68■■□□□ 1.06
MYCNP04198 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MYCNP04198 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MYCNP04198 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.68■■□□□ 1.06
MYCNP04198 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.68■■□□□ 1.06
MYCNP04198 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.68■■□□□ 1.06
MYCNP04198 AC112907.2-201ENST00000448639 330 ntBASIC21.68■■□□□ 1.06
MYCNP04198 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.68■■□□□ 1.06
MYCNP04198 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.68■■□□□ 1.06
MYCNP04198 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.68■■□□□ 1.06
MYCNP04198 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.68■■□□□ 1.06
MYCNP04198 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.68■■□□□ 1.06
MYCNP04198 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
MYCNP04198 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MYCNP04198 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
MYCNP04198 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MYCNP04198 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MYCNP04198 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.67■■□□□ 1.06
MYCNP04198 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.67■■□□□ 1.06
MYCNP04198 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.67■■□□□ 1.06
MYCNP04198 AC116407.4-201ENST00000623319 1061 ntBASIC21.67■■□□□ 1.06
MYCNP04198 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
MYCNP04198 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MYCNP04198 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
MYCNP04198 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MYCNP04198 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.66■■□□□ 1.06
MYCNP04198 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.66■■□□□ 1.06
MYCNP04198 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.66■■□□□ 1.06
MYCNP04198 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.66■■□□□ 1.06
MYCNP04198 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MYCNP04198 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MYCNP04198 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.66■■□□□ 1.06
MYCNP04198 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.66■■□□□ 1.06
MYCNP04198 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
MYCNP04198 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.65■■□□□ 1.06
MYCNP04198 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.65■■□□□ 1.06
MYCNP04198 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC21.65■■□□□ 1.06
MYCNP04198 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MYCNP04198 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.65■■□□□ 1.06
MYCNP04198 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms